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BSCI 1511L Statistics Manual: Class Data

Introduction to Biological Sciences lab, second semester

Reporting the results of statistical tests

In the scientific literature, there are standardized ways of reporting the results of statistical tests.  The following items should always be included in reporting the results of a test: the calculated value of the statistic (which varies depending on the test - for example in a t-test the calculated value of t would be reported), the number of degrees of freedom (i.e. df) if appropriate for the test, and an indication of the value of P.  In some cases, the actual value of P as calculated by statistical software is reported.  In other cases, symbols are used to indicate that a particular quantity in a table is significant at a certain P level.  For example, an asterisk (*) is often used to indicate that P<0.05 and two asterisks (**) is often used to indicate that P<0.01.  "NS" is used to indicate "not significant".  When such symbols are used in a table, it is expected that a key will explain the symbols.  Other quantities are included as appropriate. (From the Stats manual)

Specific examples for tests we have used

t-test of means or paired t-testt=0.709, df=26, P=0.485

chi-squared contingency testχ2=7.4, df=1, P=0.007

chi-squared goodness of fit testχ2=6.65, df=2, P=0.036 

regression:  slope= -7.25 mW/h, N=15, R2=0.894, P=0.029   The slope should be expressed with the correct units.  Alternatively, the entire equation of best fit can be stated rather than just the slope.

ANOVA: The results are typically reported in the form of a table with a row for each source of variability (the experimental factor(s) and the error term) and the totals. 

Source

Degrees of freedom

Sum of squares

Mean square

F ratio

P

Soap

1

4704500

4704500

7.1

0.0164

Triclosan

1

264500

264500

0.40 

0.536

Error

17

11280500

663559

 

 

Total

19

16249500

 

 

 


Note: since it is possible to calculate some values in the table from others, sometimes the totals or the mean square may be omitted.

t-test practice data (NOT required for the problem set)

General notes on importing text files

If you need to import a text file into Excel: Use the Open dialog to navagate to the place where you saved the file.  Change the file type from "All Excel Files" to "All files".  Then double-click on the text file you want to import.  The Text Import Wizard will open.  Click "next" to the first dialog.  In the next dialog, if Comma is not checked as a delimiter, check it and then click "Finish". 

 

If you need to import a text file into JMP: Import the file into the JMP software by clicking the "Open Data Table" button. Under the "Look In:" drop down list, select the Desktop. In the "Files of Type:" drop down list, select "Text Import Files". Select the data file and click the "Open" button.

Paquette Data

You can download the file (right click on the link and select “Save link as..” in Firefox or “Save target as…” in IE). Save the file on the Desktop.

Lobo Data

You can download the file (right click on the link and select “Save link as..” in Firefox or “Save target as…” in IE). Save the file on the Desktop.

Abbas et al. data

Abbas et al. (1975) examined the distribution of surface immunoglobulins on lymphocytes (Fig. 5, above) by counting the number of sites in small areas of a grid and comparing the distribution of sites per area to that which would be predicted in a random distribution (Fig. 6, above). A simplified summary of their data for Fig. 5B would be as follows:

Dots per square

Observed distribution

Expected random distribution

0 to 2

100

68

3 to 5

94

151

6 to 8

63

57

9 to 13

26

7

 

Is the distribution of surface immunoglobulins random? If not, are they too clumped or too uniform?